RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g66270.1 View Network Show in Genome Browser |
| Other Names | Os01g0885900 |
| Description | AP2 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 38489525-38490169 Nucleotide Length: 570 |
| Protein-coding | LOC_Os01g66270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54510 LOC_Os01g55799 LOC_Os01g04409 |
| Downstream Genes | LOC_Os08g04890 LOC_Os02g02600 LOC_Os02g57420 LOC_Os08g10330 LOC_Os03g21620 LOC_Os04g37904 LOC_Os06g27770 LOC_Os08g34640 LOC_Os03g46650 LOC_Os02g32490 LOC_Os10g42690 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g66270.1 |
| Rice Genome Annotation | LOC_Os01g66270.1 |
| Ricechip | LOC_Os01g66270.1 |
| KEGG | dosa:Os01t0885900-00 |