RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g66360.1 View Network Show in Genome Browser |
| Other Names | Os01g0887100 |
| Description | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 38541818-38546204 Nucleotide Length: 1071 |
| Protein-coding | LOC_Os01g66360 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56620 LOC_Os01g51280 LOC_Os01g43020 LOC_Os01g46570 LOC_Os01g53890 LOC_Os01g39630 LOC_Os01g59150 |
| Downstream Genes | LOC_Os02g45660 LOC_Os08g44280 LOC_Os04g40540 LOC_Os07g10460 LOC_Os12g36950 LOC_Os04g38570 LOC_Os02g06360 LOC_Os03g15950 LOC_Os05g49460 LOC_Os10g08550 LOC_Os05g49520 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | NONMEVIPP-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g66360.1 |
| Rice Genome Annotation | LOC_Os01g66360.1 |
| Ricechip | LOC_Os01g66360.1 |
| KEGG | dosa:Os01t0887100-01 |