RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g66500.1 View Network Show in Genome Browser |
| Other Names | Os01g0888500 |
| Description | phosphoribosylformylglycinamidine synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 38618736-38623836 Nucleotide Length: 4260 |
| Protein-coding | LOC_Os01g66500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g65260 LOC_Os01g54370 LOC_Os01g62870 LOC_Os01g62230 LOC_Os01g59990 LOC_Os01g62860 LOC_Os01g33080 LOC_Os01g25610 LOC_Os01g61814 LOC_Os01g64660 LOC_Os01g51170 More.. |
| Downstream Genes | LOC_Os08g09210 LOC_Os03g61600 LOC_Os12g09540 LOC_Os09g29190 LOC_Os02g03260 LOC_Os08g44530 LOC_Os08g39160 LOC_Os05g35580 LOC_Os03g40180 LOC_Os03g08280 LOC_Os05g23950 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn01100 rn01110 |
| Metacyc Pathways | DENOVOPURINE2-PWY PWY-841 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g66500.1 |
| Rice Genome Annotation | LOC_Os01g66500.1 |
| Ricechip | LOC_Os01g66500.1 |
| KEGG | osa:4324899 dosa:Os01t0888500-01 |
| Entrez-Gene | 4324899 |