RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g66690.1 View Network Show in Genome Browser |
| Other Names | Os01g0890900 |
| Description | ZIP4/SPO22, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 38736544-38739752 Nucleotide Length: 2862 |
| Protein-coding | LOC_Os01g66690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63250 |
| Downstream Genes | LOC_Os06g44890 LOC_Os03g24220 LOC_Os08g14230 LOC_Os04g51440 LOC_Os08g33488 LOC_Os07g01820 LOC_Os05g06110 LOC_Os03g54160 LOC_Os02g36924 LOC_Os02g49840 LOC_Os06g20340 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5819 |
| Reference | |
|---|---|
| PubMed | 22393242 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g66690.1 |
| Rice Genome Annotation | LOC_Os01g66690.1 |
| Ricechip | LOC_Os01g66690.1 |
| KEGG | osa:9266454 dosa:Os01t0890900-00 |
| Entrez-Gene | 9266454 |