RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g66730.1 View Network Show in Genome Browser |
| Other Names | Os01g0891400 |
| Description | exosome complex exonuclease RRP40, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 38755058-38759513 Nucleotide Length: 720 |
| Protein-coding | LOC_Os01g66730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08770 LOC_Os01g14950 LOC_Os01g24060 LOC_Os01g59600 LOC_Os01g33030 LOC_Os01g48210 LOC_Os01g48770 LOC_Os01g51010 LOC_Os01g43020 LOC_Os01g40250 LOC_Os01g10050 More.. |
| Downstream Genes | LOC_Os02g34570 LOC_Os03g03710 LOC_Os03g63720 LOC_Os03g06190 LOC_Os04g43922 LOC_Os09g07820 LOC_Os02g26850 LOC_Os02g57070 LOC_Os10g30100 LOC_Os05g06350 LOC_Os08g01930 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g66730.1 |
| Rice Genome Annotation | LOC_Os01g66730.1 |
| Ricechip | LOC_Os01g66730.1 |
| KEGG | osa:4324917 dosa:Os01t0891400-01 |
| Entrez-Gene | 4324917 |