RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g66940.1 View Network Show in Genome Browser |
| Other Names | Os01g0894300 |
| Description | kinase, pfkB family, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 38884741-38887723 Nucleotide Length: 972 |
| Protein-coding | LOC_Os01g66940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g25386 LOC_Os01g59110 LOC_Os01g59100 |
| Downstream Genes | LOC_Os05g09370 LOC_Os02g41590 LOC_Os02g52700 LOC_Os02g52710 LOC_Os09g38370 LOC_Os07g48960 LOC_Os12g07580 LOC_Os06g05520 LOC_Os06g49970 LOC_Os07g40630 LOC_Os02g07490 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00051 rn01100 rn00520 rn00500 rn00521 rn00524 rn01110 rn00052 rn00010 rn01120 rn00030 |
| Metacyc Pathways | ANAEROFRUCAT-PWY PWY-621 SUCUTIL-PWY PWY-3801 P122-PWY PWY-5384 P124-PWY PWY-6693 PWY-6531 PWY-842 RIBOKIN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g66940.1 |
| Rice Genome Annotation | LOC_Os01g66940.1 |
| Ricechip | LOC_Os01g66940.1 |
| KEGG | osa:4324962 dosa:Os01t0894300-01 |
| Entrez-Gene | 4324962 |