RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g67040.2 View Network Show in Genome Browser |
| Other Names | Os01g0895500 |
| Description | OsRhmbd5 - Putative Rhomboid homologue, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 38928641-38930051 Nucleotide Length: 822 |
| Protein-coding | LOC_Os01g67040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55740 LOC_Os01g37800 LOC_Os01g32880 LOC_Os01g08450 LOC_Os01g45620 LOC_Os01g47530 LOC_Os01g43910 LOC_Os01g40050 |
| Downstream Genes | LOC_Os11g47840 LOC_Os09g35730 LOC_Os05g13370 LOC_Os02g22100 LOC_Os07g09510 LOC_Os08g17600 LOC_Os02g02720 LOC_Os08g43320 LOC_Os05g25310 LOC_Os04g14680 LOC_Os12g07110 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2275a osa-miR2275b |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g67040.2 |
| Rice Genome Annotation | LOC_Os01g67040.2 |
| Ricechip | LOC_Os01g67040.2 |
| KEGG | osa:4324970 dosa:Os01t0895500-01 |
| Entrez-Gene | 4324970 |