RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g67190.1 View Network Show in Genome Browser |
| Other Names | Os01g0897300 |
| Description | ribonuclease T2 family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 38994469-38997523 Nucleotide Length: 837 |
| Protein-coding | LOC_Os01g67190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51840 LOC_Os01g04720 |
| Downstream Genes | LOC_Os07g45060 LOC_Os04g38310 LOC_Os06g38960 LOC_Os04g58130 LOC_Os07g44350 LOC_Os05g50800 LOC_Os02g47220 LOC_Os03g59210 LOC_Os03g14610 LOC_Os09g20880 LOC_Os04g35080 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g67190.1 |
| Rice Genome Annotation | LOC_Os01g67190.1 |
| Ricechip | LOC_Os01g67190.1 |
| KEGG | osa:4325104 dosa:Os01t0897300-01 |
| Entrez-Gene | 4325104 |