RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g67520.3 View Network Show in Genome Browser |
| Other Names | Os01g0901300 |
| Description | VTC2, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 39244417-39247128 Nucleotide Length: 582 |
| Protein-coding | LOC_Os01g67520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5821 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g67520.3 |
| Rice Genome Annotation | LOC_Os01g67520.3 |
| Ricechip | LOC_Os01g67520.3 |
| KEGG | osa:4325042 dosa:Os01t0901300-01 |
| Entrez-Gene | 4325042 |