RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g67880.1 View Network Show in Genome Browser |
| Other Names | Os01g0906200 |
| Description | vacuolar protein sorting-associated protein 53, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 39449661-39454731 Nucleotide Length: 1200 |
| Protein-coding | LOC_Os01g67880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59800 |
| Downstream Genes | LOC_Os07g06710 LOC_Os09g24260 LOC_Os03g53720 LOC_Os12g05090 LOC_Os06g29400 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g67880.1 |
| Rice Genome Annotation | LOC_Os01g67880.1 |
| Ricechip | LOC_Os01g67880.1 |
| KEGG | osa:4324975 dosa:Os01t0906200-01 |
| Entrez-Gene | 4324975 |