RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g68030.1 View Network Show in Genome Browser |
| Other Names | Os01g0908400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 39549164-39550832 Nucleotide Length: 186 |
| Protein-coding | LOC_Os01g68030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49190 LOC_Os01g55780 |
| Downstream Genes | LOC_Os11g06340 LOC_Os11g06330 LOC_Os12g07820 LOC_Os08g33920 LOC_Os11g37480 LOC_Os01g68710 LOC_Os02g57040 LOC_Os05g38630 LOC_Os05g23600 LOC_Os07g38970 LOC_Os03g40920 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g68030.1 |
| Rice Genome Annotation | LOC_Os01g68030.1 |
| Ricechip | LOC_Os01g68030.1 |
| KEGG | osa:4324987 dosa:Os01t0908400-01 |
| Entrez-Gene | 4324987 |