RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g68320.1 View Network Show in Genome Browser |
| Other Names | Os01g0911100 |
| Description | DEAD-box ATP-dependent RNA helicase 30, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 39688260-39693159 Nucleotide Length: 2001 |
| Protein-coding | LOC_Os01g68320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68310 LOC_Os01g11460 LOC_Os01g27730 LOC_Os01g13730 |
| Downstream Genes | LOC_Os04g58640 LOC_Os06g09570 LOC_Os07g01920 LOC_Os03g49210 LOC_Os11g28340 LOC_Os11g19250 LOC_Os10g02630 LOC_Os05g26890 LOC_Os06g38470 LOC_Os08g01070 LOC_Os11g40510 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn00250 rn01100 rn00230 rn00680 |
| Metacyc Pathways | ARGSYNBSUB-PWY PWY0-162 ARGSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g68320.1 |
| Rice Genome Annotation | LOC_Os01g68320.1 |
| Ricechip | LOC_Os01g68320.1 |
| KEGG | osa:9271802 dosa:Os01t0911100-01 |
| Entrez-Gene | 9271802 |