RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g68324.3 View Network Show in Genome Browser |
| Other Names | Os01g0911200 |
| Description | dolichyl-diphosphooligosaccharide--protein glycosyltransferase 63 kDasubunit precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 39695963-39703207 Nucleotide Length: 1176 |
| Protein-coding | LOC_Os01g68324 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g38510 LOC_Os01g40660 LOC_Os01g36920 LOC_Os01g36890 LOC_Os01g14932 LOC_Os01g23740 LOC_Os01g22520 LOC_Os01g43170 LOC_Os01g17430 LOC_Os01g19470 LOC_Os01g43220 More.. |
| Downstream Genes | LOC_Os07g10830 LOC_Os02g48110 LOC_Os05g23600 LOC_Os11g29200 LOC_Os09g38530 LOC_Os11g09280 LOC_Os05g01450 LOC_Os12g41760 LOC_Os06g45390 LOC_Os05g44360 LOC_Os05g36070 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6249a osa-miR6249b |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g68324.3 |
| Rice Genome Annotation | LOC_Os01g68324.3 |
| Ricechip | LOC_Os01g68324.3 |
| KEGG | osa:4324876 dosa:Os01t0911200-01 |
| Entrez-Gene | 4324876 |