RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g68330.1 View Network Show in Genome Browser |
| Other Names | Os01g0911300 |
| Description | antigen peptide transporter-like 1, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 39703820-39708403 Nucleotide Length: 1647 |
| Protein-coding | LOC_Os01g68330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12810 LOC_Os01g66150 LOC_Os01g21990 |
| Downstream Genes | LOC_Os03g31490 LOC_Os07g01200 LOC_Os09g39560 LOC_Os12g32970 LOC_Os07g12530 LOC_Os05g49380 LOC_Os06g30310 LOC_Os09g17620 LOC_Os12g01449 LOC_Os11g01439 LOC_Os09g04440 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 |
| Metacyc Pathways | P1-PWY PWY0-163 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g68330.1 |
| Rice Genome Annotation | LOC_Os01g68330.1 |
| Ricechip | LOC_Os01g68330.1 |
| KEGG | osa:4324312 dosa:Os01t0911300-01 |
| Entrez-Gene | 4324312 |