RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g68440.1 View Network Show in Genome Browser |
| Other Names | Os01g0912600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 39773091-39776770 Nucleotide Length: 1686 |
| Protein-coding | LOC_Os01g68440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g34614 LOC_Os01g59140 LOC_Os01g16414 |
| Downstream Genes | LOC_Os07g29420 LOC_Os04g41490 LOC_Os08g16780 LOC_Os03g45410 LOC_Os06g48230 LOC_Os12g39070 LOC_Os08g42020 LOC_Os06g40110 LOC_Os03g38960 LOC_Os04g32350 LOC_Os11g08940 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g68440.1 |
| Rice Genome Annotation | LOC_Os01g68440.1 |
| Ricechip | LOC_Os01g68440.1 |
| KEGG | osa:4324317 dosa:Os01t0912600-01 |
| Entrez-Gene | 4324317 |