RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g68680.1 View Network Show in Genome Browser |
| Other Names | Os01g0915400,Os01g0915300 |
| Description | tetratricopeptide repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 39881007-39890797 Nucleotide Length: 2934 |
| Protein-coding | LOC_Os01g68680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g01960 LOC_Os01g43030 LOC_Os01g10840 LOC_Os01g50010 LOC_Os01g63780 LOC_Os01g14860 LOC_Os01g19150 |
| Downstream Genes | LOC_Os05g01020 LOC_Os09g36740 LOC_Os07g49000 LOC_Os07g06710 LOC_Os03g22140 LOC_Os03g19200 LOC_Os05g31062 LOC_Os06g11320 LOC_Os11g05090 LOC_Os08g41390 LOC_Os07g03070 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g68680.1 |
| Rice Genome Annotation | LOC_Os01g68680.1 |
| Ricechip | LOC_Os01g68680.1 |
| KEGG | dosa:Os01t0915400-00 |
| Entrez-Gene | 4334675 |