RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g68710.1 View Network Show in Genome Browser |
| Other Names | Os01g0915800 |
| Description | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 39913890-39916494 Nucleotide Length: 477 |
| Protein-coding | LOC_Os01g68710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68030 LOC_Os01g38229 LOC_Os01g14932 LOC_Os01g38180 LOC_Os01g55780 |
| Downstream Genes | LOC_Os11g37480 LOC_Os05g24601 LOC_Os04g28420 LOC_Os08g06470 LOC_Os08g41390 LOC_Os05g48240 LOC_Os02g28980 LOC_Os03g14260 LOC_Os04g36890 LOC_Os03g38520 LOC_Os11g07280 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6248 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g68710.1 |
| Rice Genome Annotation | LOC_Os01g68710.1 |
| Ricechip | LOC_Os01g68710.1 |
| KEGG | osa:4324328 dosa:Os01t0915800-01 |
| Entrez-Gene | 4324328 |