RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g68950.1 View Network Show in Genome Browser |
| Other Names | Os01g0918300 |
| Description | ubiquitin family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 40064645-40066273 Nucleotide Length: 303 |
| Protein-coding | LOC_Os01g68950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g25370 LOC_Os01g36930 LOC_Os01g15260 LOC_Os01g54550 LOC_Os01g22490 LOC_Os01g52490 LOC_Os01g66580 LOC_Os01g62840 LOC_Os01g36920 LOC_Os01g36890 LOC_Os01g56550 More.. |
| Downstream Genes | LOC_Os10g39120 LOC_Os03g03130 LOC_Os08g33340 LOC_Os07g39780 LOC_Os03g60550 LOC_Os05g11770 LOC_Os10g40140 LOC_Os08g05890 LOC_Os09g24200 LOC_Os06g07978 LOC_Os06g07878 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | P61-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g68950.1 |
| Rice Genome Annotation | LOC_Os01g68950.1 |
| Ricechip | LOC_Os01g68950.1 |
| KEGG | osa:4324360 dosa:Os01t0918300-01 |
| Entrez-Gene | 4324360 |