RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g69080.1 View Network Show in Genome Browser |
| Other Names | Os01g0919900 |
| Description | acyl-desaturase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 40146507-40150833 Nucleotide Length: 1203 |
| Protein-coding | LOC_Os01g69080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g37820 LOC_Os01g68860 LOC_Os01g54020 |
| Downstream Genes | LOC_Os06g14620 LOC_Os06g03720 LOC_Os06g44880 LOC_Os03g38020 LOC_Os02g49870 LOC_Os05g01530 LOC_Os02g36570 LOC_Os02g38820 LOC_Os03g08070 LOC_Os12g12580 LOC_Os01g71190 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00061 rn01040 |
| Metacyc Pathways | PWY-5147 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g69080.1 |
| Rice Genome Annotation | LOC_Os01g69080.1 |
| Ricechip | LOC_Os01g69080.1 |
| KEGG | osa:4327738 dosa:Os01t0919900-01 |
| Entrez-Gene | 4327738 |