RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g69120.1 View Network Show in Genome Browser |
| Other Names | Os01g0920300 |
| Description | uncharacterized RNA methyltransferase pc1998, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 40175649-40181633 Nucleotide Length: 1623 |
| Protein-coding | LOC_Os01g69120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g05694 |
| Downstream Genes | LOC_Os02g41470 LOC_Os11g43600 LOC_Os03g21560 LOC_Os04g20280 LOC_Os03g03860 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00380 rn00624 rn01120 rn00340 rn00350 rn00130 rn01100 rn01110 |
| Metacyc Pathways | PWY-4021 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g69120.1 |
| Rice Genome Annotation | LOC_Os01g69120.1 |
| Ricechip | LOC_Os01g69120.1 |
| KEGG | osa:4327742 dosa:Os01t0920300-01 |
| Entrez-Gene | 4327742 |