RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g70010.1 View Network Show in Genome Browser |
| Other Names | Os01g0924800 |
| Description | ribosomal protein L7Ae, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 40496343-40498279 Nucleotide Length: 732 |
| Protein-coding | LOC_Os01g70010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59990 LOC_Os01g16890 LOC_Os01g10820 LOC_Os01g25610 LOC_Os01g64090 LOC_Os01g04730 LOC_Os01g61814 LOC_Os01g19840 LOC_Os01g67134 LOC_Os01g22490 LOC_Os01g52490 More.. |
| Downstream Genes | LOC_Os07g12250 LOC_Os05g19370 LOC_Os03g40180 LOC_Os11g29190 LOC_Os04g28180 LOC_Os05g30530 LOC_Os03g22180 LOC_Os05g40820 LOC_Os04g50990 LOC_Os02g47140 LOC_Os09g31180 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g70010.1 |
| Rice Genome Annotation | LOC_Os01g70010.1 |
| Ricechip | LOC_Os01g70010.1 |
| KEGG | osa:4327228 dosa:Os01t0924800-00 |
| Entrez-Gene | 4327228 |