RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g70090.1 View Network Show in Genome Browser |
| Other Names | Os01g0925200 |
| Description | enoyl-CoA hydratase/isomerase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 40563530-40566440 Nucleotide Length: 876 |
| Protein-coding | LOC_Os01g70090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g50820 LOC_Os01g27630 LOC_Os01g27210 LOC_Os01g48690 |
| Downstream Genes | LOC_Os05g45300 LOC_Os04g52400 LOC_Os02g12800 LOC_Os04g24530 LOC_Os02g12794 LOC_Os05g01700 LOC_Os01g73530 LOC_Os02g02720 LOC_Os06g10620 LOC_Os06g37440 LOC_Os09g06560 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00280 rn01100 rn01110 |
| Metacyc Pathways | P3-PWY P127-PWY CENTFERM-PWY PWY-5177 PWY-5136 FAO-PWY PWY-5138 ILEUDEG-PWY VALDEG-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g70090.1 |
| Rice Genome Annotation | LOC_Os01g70090.1 |
| Ricechip | LOC_Os01g70090.1 |
| KEGG | osa:4327232 dosa:Os01t0925200-01 |
| Entrez-Gene | 4327232 |