RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g70100.1 View Network Show in Genome Browser |
| Other Names | Os01g0925300 |
| Description | zinc finger DHHC domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 40566660-40569777 Nucleotide Length: 1242 |
| Protein-coding | LOC_Os01g70100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56420 LOC_Os01g04260 LOC_Os01g56430 |
| Downstream Genes | LOC_Os05g45930 LOC_Os06g01500 LOC_Os05g49780 LOC_Os11g34860 LOC_Os06g43680 LOC_Os07g12770 LOC_Os03g60260 LOC_Os05g43140 LOC_Os04g20810 LOC_Os03g64030 LOC_Os09g38440 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1846e |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g70100.1 |
| Rice Genome Annotation | LOC_Os01g70100.1 |
| Ricechip | LOC_Os01g70100.1 |
| KEGG | osa:4327233 dosa:Os01t0925300-01 |
| Entrez-Gene | 4327233 |