RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g70140.1 View Network Show in Genome Browser |
| Other Names | Os01g0925800 |
| Description | ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 40595852-40599111 Nucleotide Length: 588 |
| Protein-coding | LOC_Os01g70140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g32800 LOC_Os01g08970 LOC_Os01g16190 LOC_Os01g60410 LOC_Os01g60360 LOC_Os01g48280 LOC_Os01g46926 LOC_Os01g16330 LOC_Os01g22490 LOC_Os01g08200 LOC_Os01g62244 More.. |
| Downstream Genes | LOC_Os03g08280 LOC_Os07g49150 LOC_Os02g11050 LOC_Os03g63430 LOC_Os03g18690 LOC_Os04g56646 LOC_Os07g25420 LOC_Os06g07978 LOC_Os06g07878 LOC_Os04g40850 LOC_Os06g07140 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g70140.1 |
| Rice Genome Annotation | LOC_Os01g70140.1 |
| Ricechip | LOC_Os01g70140.1 |
| KEGG | osa:4327237 dosa:Os01t0925800-01 |
| Entrez-Gene | 4327237 |