RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g70270.1 View Network Show in Genome Browser |
| Other Names | Os01g0927600 |
| Description | auxin response factor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 40695642-40700998 Nucleotide Length: 2427 |
| Protein-coding | LOC_Os01g70270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009838 | abscission | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os07g12200 LOC_Os07g12170 LOC_Os10g25680 LOC_Os08g31460 LOC_Os05g39240 LOC_Os08g39370 LOC_Os03g17070 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g70270.1 |
| Rice Genome Annotation | LOC_Os01g70270.1 |
| Ricechip | LOC_Os01g70270.1 |
| KEGG | osa:4326957 dosa:Os01t0927600-01 |
| Entrez-Gene | 4326957 |