RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g70330.1 View Network Show in Genome Browser |
| Other Names | Os01g0928300 |
| Description | prefoldin subunit family protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 40739077-40743760 Nucleotide Length: 1227 |
| Protein-coding | LOC_Os01g70330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62040 LOC_Os01g59140 LOC_Os01g19480 LOC_Os01g56550 LOC_Os01g66960 LOC_Os01g69110 LOC_Os01g69970 LOC_Os01g17430 LOC_Os01g17330 |
| Downstream Genes | LOC_Os12g37590 LOC_Os07g40460 LOC_Os07g08170 LOC_Os05g46330 LOC_Os06g08770 LOC_Os02g10640 LOC_Os10g34670 LOC_Os06g40560 LOC_Os11g36050 LOC_Os05g43450 LOC_Os11g10100 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 osa-miR2864.1 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g70330.1 |
| Rice Genome Annotation | LOC_Os01g70330.1 |
| Ricechip | LOC_Os01g70330.1 |
| KEGG | osa:9272710 dosa:Os01t0928300-01 |
| Entrez-Gene | 9272710 |