RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g70430.1 View Network Show in Genome Browser |
| Other Names | Os01g0929500 |
| Description | oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 40794124-40796977 Nucleotide Length: 993 |
| Protein-coding | LOC_Os01g70430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g40570 |
| Downstream Genes | LOC_Os03g62590 LOC_Os08g37130 LOC_Os05g04870 LOC_Os12g27830 LOC_Os04g40730 LOC_Os04g52400 LOC_Os02g47350 LOC_Os12g43740 LOC_Os07g46860 LOC_Os04g38420 LOC_Os02g38440 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5527 osa-miR2874 |
| Pathways | |
|---|---|
| Metacyc Pathways | ENTBACSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g70430.1 |
| Rice Genome Annotation | LOC_Os01g70430.1 |
| Ricechip | LOC_Os01g70430.1 |
| KEGG | osa:4326939 dosa:Os01t0929500-01 |
| Entrez-Gene | 4326939 |