RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g70580.1 View Network Show in Genome Browser |
| Other Names | Os01g0931400 |
| Description | thiamin pyrophosphokinase 1, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 40868708-40871884 Nucleotide Length: 795 |
| Protein-coding | LOC_Os01g70580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g39970 LOC_Os01g53840 LOC_Os01g04490 LOC_Os01g45380 LOC_Os01g02290 LOC_Os01g04580 LOC_Os01g12430 LOC_Os01g67160 LOC_Os01g54350 LOC_Os01g02400 LOC_Os01g62080 More.. |
| Downstream Genes | LOC_Os06g36590 LOC_Os04g46100 LOC_Os02g07720 LOC_Os04g31270 LOC_Os09g32810 LOC_Os08g39170 LOC_Os10g22890 LOC_Os03g49750 LOC_Os06g41510 LOC_Os02g34790 LOC_Os03g57780 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00730 rn01100 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g70580.1 |
| Rice Genome Annotation | LOC_Os01g70580.1 |
| Ricechip | LOC_Os01g70580.1 |
| KEGG | osa:4326818 dosa:Os01t0931400-02 |
| Entrez-Gene | 4326818 |