RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g70950.1 View Network Show in Genome Browser |
| Other Names | Os01g0935600 |
| Description | spermatogenesis-associated protein 20 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 41066583-41070764 Nucleotide Length: 1569 |
| Protein-coding | LOC_Os01g70950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51200 LOC_Os01g38950 |
| Downstream Genes | LOC_Os05g51560 LOC_Os02g56560 LOC_Os03g07190 LOC_Os03g10300 LOC_Os04g43490 LOC_Os02g40860 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 |
| Metacyc Pathways | PWY0-166 P1-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g70950.1 |
| Rice Genome Annotation | LOC_Os01g70950.1 |
| Ricechip | LOC_Os01g70950.1 |
| KEGG | osa:4326794 dosa:Os01t0935600-02 |
| Entrez-Gene | 4326794 |