RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g71230.1 View Network Show in Genome Browser |
| Other Names | Os01g0938900 |
| Description | nascent polypeptide-associated complex subunit alpha-like protein 3, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 41214311-41217069 Nucleotide Length: 609 |
| Protein-coding | LOC_Os01g71230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g61814 LOC_Os01g25610 LOC_Os01g59990 LOC_Os01g49290 LOC_Os01g22490 LOC_Os01g60790 LOC_Os01g59730 LOC_Os01g33030 LOC_Os01g67134 LOC_Os01g10820 LOC_Os01g03070 More.. |
| Downstream Genes | LOC_Os03g63400 LOC_Os03g01910 LOC_Os10g34180 LOC_Os08g02410 LOC_Os03g60400 LOC_Os02g27760 LOC_Os08g02400 LOC_Os05g48310 LOC_Os05g48220 LOC_Os02g56990 LOC_Os02g02130 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g71230.1 |
| Rice Genome Annotation | LOC_Os01g71230.1 |
| Ricechip | LOC_Os01g71230.1 |
| KEGG | osa:4326505 dosa:Os01t0938900-01 |
| Entrez-Gene | 4326505 |