RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g71270.1 View Network Show in Genome Browser |
| Other Names | Os01g0939500 |
| Description | eukaryotic peptide chain release factor subunit 1-1, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 41242467-41243837 Nucleotide Length: 1311 |
| Protein-coding | LOC_Os01g71270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62350 LOC_Os01g04730 LOC_Os01g10820 LOC_Os01g24690 LOC_Os01g48770 LOC_Os01g59990 LOC_Os01g25610 LOC_Os01g61814 LOC_Os01g19840 LOC_Os01g51020 LOC_Os01g60790 More.. |
| Downstream Genes | LOC_Os04g20220 LOC_Os05g38520 LOC_Os03g18570 LOC_Os05g27940 LOC_Os03g18580 LOC_Os04g27860 LOC_Os02g27769 LOC_Os08g02340 LOC_Os11g38959 LOC_Os03g05980 LOC_Os11g24610 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g71270.1 |
| Rice Genome Annotation | LOC_Os01g71270.1 |
| Ricechip | LOC_Os01g71270.1 |
| KEGG | osa:4326511 dosa:Os01t0939500-00 |
| Entrez-Gene | 4326511 |