RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g71300.1 View Network Show in Genome Browser |
| Other Names | Os01g0939700 |
| Description | S-formylglutathione hydrolase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 41251226-41272319 Nucleotide Length: 879 |
| Protein-coding | LOC_Os01g71300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42850 LOC_Os01g62870 LOC_Os01g62860 LOC_Os01g12800 LOC_Os01g34480 LOC_Os01g09460 LOC_Os01g11940 LOC_Os01g62880 LOC_Os01g43090 LOC_Os01g40280 LOC_Os01g12830 More.. |
| Downstream Genes | LOC_Os02g42520 LOC_Os02g57040 LOC_Os10g07229 LOC_Os11g10510 LOC_Os11g10480 LOC_Os11g10520 LOC_Os03g08999 LOC_Os03g09020 LOC_Os04g01600 LOC_Os07g42924 LOC_Os08g01760 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00680 rn01120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g71300.1 |
| Rice Genome Annotation | LOC_Os01g71300.1 |
| Ricechip | LOC_Os01g71300.1 |
| KEGG | osa:4326513 dosa:Os01t0939700-01 |
| Entrez-Gene | 4326513 |