RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g71340.1 View Network Show in Genome Browser |
| Other Names | Os01g0940700 |
| Description | glycosyl hydrolases family 17, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 41346574-41348411 Nucleotide Length: 993 |
| Protein-coding | LOC_Os01g71340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67054 LOC_Os01g55040 LOC_Os01g11240 LOC_Os01g47070 LOC_Os01g58730 LOC_Os01g19840 LOC_Os01g43540 LOC_Os01g25386 |
| Downstream Genes | LOC_Os09g37600 LOC_Os02g36940 LOC_Os02g36950 LOC_Os03g58580 LOC_Os10g02970 LOC_Os03g30790 LOC_Os07g35560 LOC_Os03g61740 LOC_Os06g05520 LOC_Os03g01180 LOC_Os03g51430 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 |
| Metacyc Pathways | PWY-1001 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g71340.1 |
| Rice Genome Annotation | LOC_Os01g71340.1 |
| Ricechip | LOC_Os01g71340.1 |
| KEGG | osa:4326518 dosa:Os01t0940700-02 |
| Entrez-Gene | 4326518 |