RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g71474.1 View Network Show in Genome Browser |
| Other Names | Os01g0942300 |
| Description | glycosyl hydrolases family 17, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 41397748-41401593 Nucleotide Length: 1047 |
| Protein-coding | LOC_Os01g71474 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g39830 LOC_Os01g33160 LOC_Os01g64860 LOC_Os01g55040 LOC_Os01g25560 LOC_Os01g11710 LOC_Os01g04710 LOC_Os01g47070 LOC_Os01g59150 LOC_Os01g62490 LOC_Os01g71280 More.. |
| Downstream Genes | LOC_Os11g26340 LOC_Os11g26190 LOC_Os04g42620 LOC_Os07g08330 LOC_Os02g58720 LOC_Os03g03164 LOC_Os04g31410 LOC_Os06g42800 LOC_Os03g28330 LOC_Os08g32160 LOC_Os05g11990 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 |
| Metacyc Pathways | PWY-1001 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g71474.1 |
| Rice Genome Annotation | LOC_Os01g71474.1 |
| Ricechip | LOC_Os01g71474.1 |
| KEGG | osa:4326054 dosa:Os01t0942300-01 |
| Entrez-Gene | 4326054 |