RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g72220.1 View Network Show in Genome Browser |
| Other Names | Os01g0951000 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 41873949-41880601 Nucleotide Length: 1584 |
| Protein-coding | LOC_Os01g72220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54870 LOC_Os01g70010 LOC_Os01g47660 LOC_Os01g51300 LOC_Os01g16146 |
| Downstream Genes | LOC_Os04g18010 LOC_Os10g29560 LOC_Os06g21470 LOC_Os05g46570 LOC_Os09g39590 LOC_Os12g07050 LOC_Os03g63590 LOC_Os03g16110 LOC_Os12g38380 LOC_Os03g10990 LOC_Os07g08330 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g72220.1 |
| Rice Genome Annotation | LOC_Os01g72220.1 |
| Ricechip | LOC_Os01g72220.1 |
| KEGG | osa:4325772 dosa:Os01t0951000-02 |
| Entrez-Gene | 4325772 |