RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g72250.1 View Network Show in Genome Browser |
| Other Names | Os01g0951400 |
| Description | uridine 5-monophosphate synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 41892678-41896242 Nucleotide Length: 1428 |
| Protein-coding | LOC_Os01g72250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007154 | cell communication | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g65260 LOC_Os01g54370 LOC_Os01g32800 LOC_Os01g16190 LOC_Os01g36930 LOC_Os01g62040 |
| Downstream Genes | LOC_Os05g08950 LOC_Os07g30150 LOC_Os04g42520 LOC_Os05g35580 LOC_Os02g52940 LOC_Os02g03540 LOC_Os12g39860 LOC_Os08g09210 LOC_Os04g57950 LOC_Os07g43170 LOC_Os06g41360 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 |
| Metacyc Pathways | PWY0-162 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g72250.1 |
| Rice Genome Annotation | LOC_Os01g72250.1 |
| Ricechip | LOC_Os01g72250.1 |
| KEGG | osa:4325740 dosa:Os01t0951400-01 |
| Entrez-Gene | 4325740 |