RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g72290.1 View Network Show in Genome Browser |
| Other Names | Os01g0952000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 41914684-41915936 Nucleotide Length: 672 |
| Protein-coding | LOC_Os01g72290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os10g02040 LOC_Os05g09704 LOC_Os05g10210 LOC_Os08g35760 LOC_Os10g40420 LOC_Os02g40260 LOC_Os03g20760 LOC_Os10g05820 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2923 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g72290.1 |
| Rice Genome Annotation | LOC_Os01g72290.1 |
| Ricechip | LOC_Os01g72290.1 |
| KEGG | osa:4325743 dosa:Os01t0952000-02 |
| Entrez-Gene | 4325743 |