RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g72420.1 View Network Show in Genome Browser |
| Other Names | Os01g0953500 |
| Description | C2 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 41999585-42002803 Nucleotide Length: 1194 |
| Protein-coding | LOC_Os01g72420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63470 LOC_Os01g47040 LOC_Os01g03820 LOC_Os01g70790 LOC_Os01g62430 |
| Downstream Genes | LOC_Os09g39770 LOC_Os09g35780 LOC_Os09g07800 LOC_Os07g01770 LOC_Os04g55220 LOC_Os04g44870 LOC_Os02g57000 LOC_Os02g22130 LOC_Os02g20970 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2926 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g72420.1 |
| Rice Genome Annotation | LOC_Os01g72420.1 |
| Ricechip | LOC_Os01g72420.1 |
| KEGG | osa:4325399 dosa:Os01t0953500-01 |
| Entrez-Gene | 4325399 |