RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g72530.1 View Network Show in Genome Browser |
| Other Names | Os01g0955100 |
| Description | OsCML31 - Calmodulin-related calcium sensor protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42073984-42074982 Nucleotide Length: 456 |
| Protein-coding | LOC_Os01g72530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g50420 LOC_Os01g64470 LOC_Os01g04280 LOC_Os01g45250 LOC_Os01g38980 LOC_Os01g70790 |
| Downstream Genes | LOC_Os06g04240 LOC_Os02g41510 LOC_Os09g28440 LOC_Os05g08900 LOC_Os05g31620 LOC_Os09g26820 LOC_Os05g39720 LOC_Os03g07380 LOC_Os06g46950 LOC_Os08g35470 LOC_Os09g24580 More.. |
| Reference | |
|---|---|
| PubMed | 21359958 17263873 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g72530.1 |
| Rice Genome Annotation | LOC_Os01g72530.1 |
| Ricechip | LOC_Os01g72530.1 |
| KEGG | osa:4325408 dosa:Os01t0955100-01 |
| Entrez-Gene | 4325408 |