RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g72780.1 View Network Show in Genome Browser |
| Other Names | Os01g0957900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42216976-42228070 Nucleotide Length: 3531 |
| Protein-coding | LOC_Os01g72780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62210 LOC_Os01g10790 |
| Downstream Genes | LOC_Os04g28060 LOC_Os03g18840 LOC_Os04g49590 LOC_Os04g49580 LOC_Os12g06910 LOC_Os07g40750 LOC_Os12g41620 LOC_Os08g27070 LOC_Os06g05250 LOC_Os04g36890 LOC_Os10g18220 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g72780.1 |
| Rice Genome Annotation | LOC_Os01g72780.1 |
| Ricechip | LOC_Os01g72780.1 |
| KEGG | osa:4325385 dosa:Os01t0957900-01 |
| Entrez-Gene | 4325385 |