RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g72790.1 View Network Show in Genome Browser |
| Other Names | Os01g0958000 |
| Description | cyclin-dependent kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42229506-42232641 Nucleotide Length: 1542 |
| Protein-coding | LOC_Os01g72790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g64820 LOC_Os01g62080 LOC_Os01g19130 LOC_Os01g62900 LOC_Os01g40840 LOC_Os01g08970 LOC_Os01g41120 LOC_Os01g36920 LOC_Os01g36890 LOC_Os01g59120 LOC_Os01g17402 More.. |
| Downstream Genes | LOC_Os02g05630 LOC_Os05g45420 LOC_Os06g48300 LOC_Os02g55560 LOC_Os04g37904 LOC_Os04g56450 LOC_Os06g33549 LOC_Os12g35030 LOC_Os04g47580 LOC_Os05g33040 LOC_Os04g46000 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g72790.1 |
| Rice Genome Annotation | LOC_Os01g72790.1 |
| Ricechip | LOC_Os01g72790.1 |
| KEGG | osa:4325386 dosa:Os01t0958000-01 |
| Entrez-Gene | 4325386 |