RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g72834.1 View Network Show in Genome Browser |
| Other Names | Os01g0958500 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42247696-42255403 Nucleotide Length: 933 |
| Protein-coding | LOC_Os01g72834 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g71200 |
| Downstream Genes | LOC_Os05g13650 LOC_Os09g37720 LOC_Os03g03140 LOC_Os07g46820 LOC_Os03g37270 LOC_Os02g40900 LOC_Os10g30370 LOC_Os06g50890 LOC_Os03g58720 LOC_Os03g17030 LOC_Os03g05830 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g72834.1 |
| Rice Genome Annotation | LOC_Os01g72834.1 |
| Ricechip | LOC_Os01g72834.1 |
| KEGG | osa:4325390 dosa:Os01t0958500-01 |
| Entrez-Gene | 4325390 |