RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os01g72880.1 View Network Show in Genome Browser
Other Names	Os01g0958900
Description	DNA mismatch repair protein Mlh1, putative, expressed
Gene Attributes	Chromosome: Chr1 CDS Coordinates (5'-3'): 42268880-42274913 Nucleotide Length: 2175
Protein-coding	LOC_Os01g72880

Gene Ontology Classification
GO	Name	Type	Code
GO:0009056	catabolic process	Biological Process	IEA
GO:0007049	cell cycle	Biological Process	IEA
GO:0006259	DNA metabolic process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g49390 LOC_Os01g56940 LOC_Os01g69920 LOC_Os01g70300 LOC_Os01g36840 LOC_Os01g08540 LOC_Os01g49680 LOC_Os01g57110 LOC_Os01g49000
Downstream Genes	LOC_Os02g37920 LOC_Os06g51350 LOC_Os01g73760 LOC_Os04g58630 LOC_Os05g19270 LOC_Os09g24220 LOC_Os07g11050 LOC_Os03g59570 LOC_Os09g37930 LOC_Os11g16580 LOC_Os05g24660 More..

Database Links
Gramene	LOC_Os01g72880.1
Rice Genome Annotation	LOC_Os01g72880.1
Ricechip	LOC_Os01g72880.1
KEGG	osa:4325393 dosa:Os01t0958900-01
Entrez-Gene	4325393