RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g72890.2 View Network Show in Genome Browser |
| Other Names | Os01g0959000 |
| Description | transposon protein, putative, CACTA, En/Spm sub-class, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42275543-42280567 Nucleotide Length: 1296 |
| Protein-coding | LOC_Os01g72890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43170 LOC_Os01g36570 LOC_Os01g56550 LOC_Os01g51154 LOC_Os01g59140 LOC_Os01g34614 LOC_Os01g15860 LOC_Os01g72220 LOC_Os01g50320 LOC_Os01g56600 LOC_Os01g67860 More.. |
| Downstream Genes | LOC_Os02g01740 LOC_Os03g17010 LOC_Os04g41100 LOC_Os02g39010 LOC_Os03g53220 LOC_Os03g49520 LOC_Os07g07220 LOC_Os08g37960 LOC_Os06g40600 LOC_Os04g58640 LOC_Os07g47630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g72890.2 |
| Rice Genome Annotation | LOC_Os01g72890.2 |
| Ricechip | LOC_Os01g72890.2 |
| KEGG | osa:4325394 dosa:Os01t0959000-01 |
| Entrez-Gene | 4325394 |