RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g72950.1 View Network Show in Genome Browser |
| Other Names | Os01g0959900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42312149-42313577 Nucleotide Length: 495 |
| Protein-coding | LOC_Os01g72950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48300 LOC_Os01g53240 LOC_Os01g04950 LOC_Os01g66000 LOC_Os01g68450 LOC_Os01g64270 LOC_Os01g36970 LOC_Os01g45250 LOC_Os01g40690 LOC_Os01g35050 LOC_Os01g21990 More.. |
| Downstream Genes | LOC_Os03g02640 LOC_Os06g24540 LOC_Os02g51020 LOC_Os05g33280 LOC_Os09g37020 LOC_Os04g15690 LOC_Os11g47730 LOC_Os03g41080 LOC_Os04g58620 LOC_Os09g23540 LOC_Os12g02120 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g72950.1 |
| Rice Genome Annotation | LOC_Os01g72950.1 |
| Ricechip | LOC_Os01g72950.1 |
| KEGG | osa:4325238 dosa:Os01t0959900-02 |
| Entrez-Gene | 4325238 |