RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g72990.1 View Network Show in Genome Browser |
| Other Names | Os01g0960400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42336217-42349399 Nucleotide Length: 2859 |
| Protein-coding | LOC_Os01g72990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g41630 LOC_Os01g49330 LOC_Os01g70580 LOC_Os01g25440 LOC_Os01g50050 LOC_Os01g08700 |
| Downstream Genes | LOC_Os04g35170 LOC_Os03g02410 LOC_Os11g13670 LOC_Os07g32380 LOC_Os06g48300 LOC_Os06g33549 LOC_Os02g05630 LOC_Os06g36770 LOC_Os02g13110 LOC_Os08g32650 LOC_Os02g55560 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g72990.1 |
| Rice Genome Annotation | LOC_Os01g72990.1 |
| Ricechip | LOC_Os01g72990.1 |
| KEGG | osa:4325243 dosa:Os01t0960400-01 |
| Entrez-Gene | 4325243 |