RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g73160.1 View Network Show in Genome Browser |
| Other Names | Os01g0962600 |
| Description | 40S ribosomal protein S10, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42425424-42427258 Nucleotide Length: 540 |
| Protein-coding | LOC_Os01g73160 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62350 LOC_Os01g49290 LOC_Os01g61814 LOC_Os01g54870 LOC_Os01g47660 LOC_Os01g25610 LOC_Os01g10820 LOC_Os01g59990 LOC_Os01g48770 LOC_Os01g19840 LOC_Os01g04730 More.. |
| Downstream Genes | LOC_Os11g05562 LOC_Os05g48310 LOC_Os02g40880 LOC_Os05g38520 LOC_Os09g24690 LOC_Os05g48220 LOC_Os08g44480 LOC_Os09g39540 LOC_Os07g10720 LOC_Os08g06040 LOC_Os08g33920 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g73160.1 |
| Rice Genome Annotation | LOC_Os01g73160.1 |
| Ricechip | LOC_Os01g73160.1 |
| KEGG | osa:4324553 dosa:Os01t0962600-01 |
| Entrez-Gene | 4324553 |