RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g73230.1 View Network Show in Genome Browser |
| Other Names | Os01g0963300 |
| Description | syntaxin 6, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42447904-42450923 Nucleotide Length: 705 |
| Protein-coding | LOC_Os01g73230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51120 LOC_Os01g37980 LOC_Os01g08510 LOC_Os01g49690 LOC_Os01g64650 LOC_Os01g04840 |
| Downstream Genes | LOC_Os06g02570 LOC_Os07g07000 LOC_Os06g39050 LOC_Os03g57310 LOC_Os03g52650 LOC_Os02g24134 LOC_Os03g58840 LOC_Os03g06960 LOC_Os07g09600 LOC_Os03g17990 LOC_Os04g13470 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g73230.1 |
| Rice Genome Annotation | LOC_Os01g73230.1 |
| Ricechip | LOC_Os01g73230.1 |
| KEGG | osa:4324558 dosa:Os01t0963300-01 |
| Entrez-Gene | 4324558 |