RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g73300.1 View Network Show in Genome Browser |
| Other Names | Os01g0964000 |
| Description | VAMP-like protein YKT62, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42479663-42483372 Nucleotide Length: 645 |
| Protein-coding | LOC_Os01g73300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51120 LOC_Os01g37980 LOC_Os01g13350 LOC_Os01g55040 LOC_Os01g57570 LOC_Os01g73230 |
| Downstream Genes | LOC_Os06g09850 LOC_Os03g57760 LOC_Os03g42320 LOC_Os08g01880 LOC_Os06g02570 LOC_Os04g52460 LOC_Os09g36976 LOC_Os08g18110 LOC_Os12g05810 LOC_Os04g44810 LOC_Os02g03450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g73300.1 |
| Rice Genome Annotation | LOC_Os01g73300.1 |
| Ricechip | LOC_Os01g73300.1 |
| KEGG | osa:4324461 dosa:Os01t0964000-01 |
| Entrez-Gene | 4324461 |