RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os01g73430.1 View Network Show in Genome Browser |
Other Names | Os01g0965000 |
Description | RNA polymerase IV largest subunit, putative, expressed |
Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 42549843-42556862 Nucleotide Length: 4713 |
Protein-coding | LOC_Os01g73430 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009058 | biosynthetic process | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0006259 | DNA metabolic process | Biological Process | IEA | |
GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
GO:0003677 | DNA binding | Molecular Function | IEA | |
GO:0005515 | protein binding | Molecular Function | IEA | |
GO:0016740 | transferase activity | Molecular Function | IEA | |
GO:0005622 | intracellular | Cellular Component | IEA | |
GO:0005730 | nucleolus | Cellular Component | IEA | |
GO:0005654 | nucleoplasm | Cellular Component | IEA | |
GO:0005634 | nucleus | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g47330 LOC_Os01g61814 LOC_Os01g64090 LOC_Os01g59140 LOC_Os01g14830 LOC_Os01g59730 LOC_Os01g16890 LOC_Os01g42980 LOC_Os01g15290 LOC_Os01g42640 LOC_Os01g62210 More.. |
Downstream Genes | LOC_Os03g44484 LOC_Os10g35290 LOC_Os04g54840 LOC_Os08g07480 LOC_Os03g28960 LOC_Os05g22830 LOC_Os04g16820 LOC_Os05g22860 LOC_Os05g49320 LOC_Os03g60400 LOC_Os08g44450 More.. |
Database Links | |
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Gramene | LOC_Os01g73430.1 |
Rice Genome Annotation | LOC_Os01g73430.1 |
Ricechip | LOC_Os01g73430.1 |
KEGG | dosa:Os01t0965000-00 |